STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSMAP00000001614Small nuclear RNA activating complex, polypeptide 1b. (357 aa)    
Predicted Functional Partners:
SMAX5B_011387
Putative snRNA-activating protein complex subunit 3.
    
 0.981
SMAX5B_015225
Putative snRNA-activating protein complex subunit 4.
    
 0.980
ENSSMAP00000023693
Small nuclear RNA activating complex, polypeptide 5.
    
 0.976
SMAX5B_012370
Putative TATA-box-binding protein-like.
   
 0.923
SMAX5B_006330
Putative transcription initiation factor IIB.
    
 0.896
SMAX5B_006298
Putative transcription initiation factor IIB.
    
 0.896
SMAX5B_004717
Transcription initiation factor IIA subunit 2; TFIIA is a component of the transcription machinery of RNA polymerase II and plays an important role in transcriptional activation; Belongs to the TFIIA subunit 2 family.
    
  0.880
SMAX5B_008309
Putative transcription initiation factor IIA subunit 1-like.
    
  0.871
SMAX5B_008278
Putative TATA box-binding protein-like protein 1 isoform 2.
   
 0.859
SMAX5B_020644
Putative TATA-box-binding protein-like.
   
 0.854
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.