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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSMAP00000001627annotation not available (563 aa)    
Predicted Functional Partners:
ENSSMAP00000008002
Ribosomal protein S27a.
    
 0.916
ENSSMAP00000034351
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
 0.886
ENSSMAP00000000415
annotation not available
    
 0.820
ENSSMAP00000014581
annotation not available
    
 0.820
ENSSMAP00000014631
annotation not available
    
 0.800
SMAX5B_008875
Ube2k protein; Belongs to the ubiquitin-conjugating enzyme family.
   
 0.752
SMAX5B_007516
Ube2k protein; Belongs to the ubiquitin-conjugating enzyme family.
   
 0.752
SMAX5B_006457
Ubiquitin-conjugating enzyme E2 variant 2.
   
 0.664
SMAX5B_013883
Mothers against decapentaplegic homolog.
   
 0.640
SMAX5B_009883
Mothers against decapentaplegic homolog.
   
 0.640
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.