Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
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[Homology]
Score
SMAX5B_003534Putative transcription factor IIIB 50 kDa subunit. (455 aa)    
Predicted Functional Partners:
SMAX5B_013983
Putative transcription factor TFIIIB component B''-like.
    
 0.999
SMAX5B_012370
Putative TATA-box-binding protein-like.
   
 0.995
SMAX5B_017380
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 0.974
SMAX5B_009051
Putative transcription factor IIIB 90 kDa subunit-like.
    
0.971
SMAX5B_009873
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 0.970
SMAX5B_003895
Putative general transcription factor 3C polypeptide 3.
    
 0.963
SMAX5B_021568
DNA-directed RNA polymerase III subunit RPC6; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Specific peripheric component of RNA polymerase III which synthesizes small RNAs, such as 5S rRNA and tRNAs; Belongs to the eukaryotic RPC34/RPC39 RNA polymerase subunit family.
    
 0.962
SMAX5B_011990
RNA polymerase III subunit C3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 0.961
SMAX5B_010855
Uncharacterized protein.
    
 0.959
SMAX5B_011387
Putative snRNA-activating protein complex subunit 3.
    
 0.955
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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