Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
SMAX5B_014653Putative E3 ubiquitin-protein ligase DTX3. (439 aa)    
Predicted Functional Partners:
SMAX5B_004702
Poly [ADP-ribose] polymerase.
   
 
 0.912
SMAX5B_018166
Putative poly isoform 2.
   
 
 0.874
SMAX5B_001706
E2-induced 5 protein-like isoform 4.
   
 
 0.874
SMAX5B_018404
Poly [ADP-ribose] polymerase.
   
 
 0.856
SMAX5B_013786
Putative neurogenic locus notch-like protein 1-like.
    
 0.776
SMAX5B_010420
Putative neurogenic locus notch-like protein 1-like.
    
 0.776
SMAX5B_015582
Putative nudC domain-containing protein 1.
    
   0.754
SMAX5B_022672
Putative neurogenic locus notch-like protein 2-like.
    
 0.736
SMAX5B_020726
Putative neurogenic locus notch-like protein 2-like.
    
 0.731
SMAX5B_002710
Putative E3 ubiquitin-protein ligase MIB2.
    
 0.691
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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