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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAX5B_012654Putative programmed cell death protein 5 isoform 2. (126 aa)    
Predicted Functional Partners:
SMAX5B_021814
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
   
    0.926
SMAX5B_008632
40S ribosomal protein S11; Belongs to the universal ribosomal protein uS17 family.
   
    0.922
SMAX5B_015573
60S ribosomal protein L30.
   
    0.914
SMAX5B_006135
40S ribosomal protein S28 isoform 2.
  
    0.912
SMAX5B_021258
Putative 60S ribosomal protein L35.
   
    0.906
SMAX5B_006124
Putative 60S ribosomal protein L23-like isoform 2; Belongs to the universal ribosomal protein uL14 family.
   
  
 0.904
SMAX5B_000679
40S ribosomal protein S3 isoform 2; Belongs to the universal ribosomal protein uS3 family.
   
    0.898
SMAX5B_016627
Ribosomal protein L34-like isoform 2.
   
    0.896
SMAX5B_007105
Putative 40S ribosomal protein S4-like isoform 2.
   
    0.883
ENSSMAP00000016109
Ribosomal protein L23a.
   
    0.873
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.