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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAX5B_012307Diphosphomevalonate decarboxylase; Performs the first committed step in the biosynthesis of isoprenes. (394 aa)    
Predicted Functional Partners:
SMAX5B_016578
Mevalonate kinase; Catalyzes the phosphorylation of mevalonate to mevalonate 5- phosphate, a key step in isoprenoid and cholesterol biosynthesis. Belongs to the GHMP kinase family. Mevalonate kinase subfamily.
 
 
 0.996
SMAX5B_001926
Putative isopentenyl-diphosphate Delta-isomerase 1.
  
 
 0.980
ENSSMAP00000026733
annotation not available
  
 0.979
SMAX5B_016809
Putative geranylgeranyl pyrophosphate synthase; Belongs to the FPP/GGPP synthase family.
  
 0.958
SMAX5B_001878
Putative decaprenyl-diphosphate synthase subunit 1; Belongs to the FPP/GGPP synthase family.
  
 0.937
SMAX5B_003455
Putative decaprenyl-diphosphate synthase subunit 2; Belongs to the FPP/GGPP synthase family.
  
 0.937
SMAX5B_003033
3-hydroxy-3-methylglutaryl coenzyme A synthase; This enzyme condenses acetyl-CoA with acetoacetyl-CoA to form HMG-CoA, which is the substrate for HMG-CoA reductase.
  
 
 0.936
SMAX5B_005723
3-hydroxy-3-methylglutaryl coenzyme A reductase.
  
 
 0.926
SMAX5B_016991
3-hydroxy-3-methylglutaryl coenzyme A reductase.
  
 
 0.925
FBXO40
Putative F-box only protein 40.
  
 0.921
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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