STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAX5B_016492Protein fem-1-like C. (618 aa)    
Predicted Functional Partners:
SMAX5B_005888
Putative UBX domain-containing protein 7.
    
 0.984
SMAX5B_001979
Cullin-2; Belongs to the cullin family.
    
 0.925
SMAX5B_001800
Transcription elongation factor B polypeptide 1 isoform 2; Belongs to the SKP1 family.
    
 0.826
SMAX5B_006467
Putative RING-box protein 1-like.
    
 0.807
SMAX5B_011154
Putative transcription elongation factor B polypeptide 2-like.
    
 0.759
ELOB
Elongin B.
    
 0.759
SMAX5B_010176
Putative RING-box protein 2-like isoform 3.
    
 0.742
SMAX5B_016914
Putative COMM domain-containing protein 8.
   
  0.720
ENSSMAP00000009288
annotation not available
    
  0.713
ENSSMAP00000023908
NEDD8 ubiquitin like modifier, like.
    
  0.713
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.