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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAX5B_016512Putative geranylgeranyl transferase type-1 subunit beta isoform 3. (368 aa)    
Predicted Functional Partners:
SMAX5B_018918
Uncharacterized protein.
    
 0.999
SMAX5B_016561
Putative coiled-coil domain-containing protein 112.
 
  
 
 0.654
ENSSMAP00000010368
3-hydroxyacyl-CoA dehydratase 2.
 
   
 0.612
SMAX5B_006832
Trifunctional purine biosynthetic protein adenosine-3; In the C-terminal section; belongs to the GART family. In the central section; belongs to the AIR synthase family.
      
 0.607
SMAX5B_004665
Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase; Catalyzes the third of the four reactions of the long-chain fatty acids elongation cycle. This endoplasmic reticulum-bound enzymatic process, allows the addition of two carbons to the chain of long- and very long-chain fatty acids/VLCFAs per cycle. This enzyme catalyzes the dehydration of the 3-hydroxyacyl-CoA intermediate into trans-2,3-enoyl-CoA, within each cycle of fatty acid elongation. Thereby, it participates to the production of VLCFAs of different chain lengths that are involved in multiple biological processes as precursors [...]
     
 0.522
ENSSMAP00000031369
annotation not available
      
 0.487
ENSSMAP00000004622
Isoprenylcysteine carboxyl methyltransferase.
      
 0.485
SMAX5B_015764
Putative hairy/enhancer-of-split related with YRPW motif protein 1-like.
    
 
 0.482
SMAX5B_000113
Putative hairy/enhancer-of-split related with YRPW motif protein 2.
    
 
 0.482
SMAX5B_011102
Putative hairy/enhancer-of-split related with YRPW motif-like protein.
    
 
 0.482
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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