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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAX5B_021848Putative neurofascin. (1307 aa)    
Predicted Functional Partners:
SMAX5B_008531
Putative contactin-associated protein 1-like.
   
 0.914
CNTN1
Putative contactin-1a-like.
    
0.860
SMAX5B_005425
Putative contactin-1.
    
0.860
SMAX5B_019540
Putative neurofascin-like.
  
  
 
0.822
SMAX5B_009589
Putative contactin-2.
   
0.795
SMAX5B_011261
Protein-tyrosine-phosphatase.
    
 
 0.731
SMAX5B_002360
Protein-tyrosine-phosphatase.
    
 
 0.731
SMAX5B_019926
Putative contactin-5.
    
0.714
SMAX5B_014161
Uncharacterized protein.
    
0.714
SMAX5B_014358
Putative contactin-4-like.
    
0.714
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.