STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAX5B_010843Putative stromal cell-derived factor 2-like protein 1. (217 aa)    
Predicted Functional Partners:
SMAX5B_010762
Putative dnaJ-like subfamily B member 11.
  
 
 0.824
SMAX5B_015302
Putative dnaJ-like subfamily C member 10.
  
 
 0.812
SMAX5B_005499
Putative cysteine-rich with EGF-like domain protein 2 isoform 2.
   
 
 0.721
SMAX5B_009951
94 kD glucose-regulated protein.
   
 
 0.716
SMAX5B_011926
GPI mannosyltransferase 2; Mannosyltransferase involved in glycosylphosphatidylinositol- anchor biosynthesis.
    
 0.713
SMAX5B_013058
Putative dystroglycan-like.
    
 0.702
SMAX5B_014984
Putative dystroglycan.
    
 0.702
ENSSMAP00000010093
CDC42 small effector 2.
  
 
 0.667
SMAX5B_014304
Putative EGF domain-specific O-linked N-acetylglucosamine transferase isoform 3.
     
 0.651
SMAX5B_013693
Protein O-linked-mannose beta-1-4-N-acetylglucosaminyltransferase 2.
     
 0.651
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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