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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSMAP00000001958Mitochondrial transcription termination factor 4. (337 aa)    
Predicted Functional Partners:
SMAX5B_006205
Putative 5-methylcytosine rRNA methyltransferase NSUN4; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.
    
 0.972
SMAX5B_012328
Putative methyltransferase NSUN3; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.
    
 0.964
SMAX5B_019619
Putative adenylate kinase 9 isoform 2.
    
  0.873
SMAX5B_016810
Putative 39S ribosomal protein L2 mitochondrial.
   
 
 0.869
SMAX5B_020371
Putative peptidyl-tRNA hydrolase ICT1 mitochondrial.
    
 
 0.866
SMAX5B_018017
Mitochondrial GTPase 1; Plays a role in the regulation of the mitochondrial ribosome assembly and of translational activity. Displays mitochondrial GTPase activity; Belongs to the TRAFAC class YlqF/YawG GTPase family. MTG1 subfamily.
   
 
 0.857
SMAX5B_012019
Putative mitochondrial assembly of ribosomal large subunit protein 1.
    
 
 0.850
SMAX5B_020853
Putative 39S ribosomal protein L12 mitochondrial.
    
 
 0.847
SMAX5B_008611
Putative rRNA methyltransferase 2 mitochondrial.
    
 
 0.844
SMAX5B_019244
Putative mitochondrial ribosome-associated GTPase 2.
    
 
 0.843
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.