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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSMAP00000002034Odr-4 GPCR localization factor homolog. (503 aa)    
Predicted Functional Partners:
SMAX5B_011390
Putative ufm1-specific protease 2.
   
 
 0.777
SMAX5B_011629
Dolichol-phosphate mannosyltransferase subunit 1; Transfers mannose from GDP-mannose to dolichol monophosphate to form dolichol phosphate mannose (Dol-P-Man) which is the mannosyl donor in pathways leading to N-glycosylation, glycosyl phosphatidylinositol membrane anchoring, and O-mannosylation of proteins.
   
  
 0.631
SMAX5B_012930
Putative inactive Ufm1-specific protease 1.
   
 
 0.621
SMAX5B_003029
Putative thioredoxin-like protein 1.
      
 0.514
SMAX5B_014264
Activity-dependent neuroprotector homeobox protein.
   
  
 0.488
SMAX5B_016418
WD_REPEATS_REGION domain-containing protein; Belongs to the WD repeat SEC13 family.
      
 0.485
SMAX5B_018330
Alkylglycerone-phosphate synthase; Catalyzes the exchange of an acyl for a long-chain alkyl group and the formation of the ether bond in the biosynthesis of ether phospholipids; Belongs to the FAD-binding oxidoreductase/transferase type 4 family.
      
 0.463
SMAX5B_006262
Putative AP-5 complex subunit zeta-1-like.
      
 0.459
SMAX5B_006768
Putative dolichyl-phosphate beta-glucosyltransferase isoform 2.
   
  
 0.437
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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