STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAX5B_000432Putative sphingolipid delta(4)-desaturase/C4-hydroxylase DES2. (322 aa)    
Predicted Functional Partners:
SMAX5B_006877
Ceramide glucosyltransferase.
   
 
 0.915
SMAX5B_013613
Putative sphingomyelin phosphodiesterase 2.
     
 0.909
SMAX5B_006282
Ketodihydrosphingosine reductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
   
 
 0.909
SPHK1
Putative sphingosine kinase 2-like.
    
 0.892
ENSSMAP00000021876
Sphingosine kinase 2.
    
 0.892
SMAX5B_022651
Alkaline ceramidase; Hydrolyzes the sphingolipid ceramide into sphingosine and free fatty acid.
   
 
 0.888
SMAX5B_011495
Putative phosphatidylcholine:ceramide cholinephosphotransferase 2.
   
 
 0.883
ENSSMAP00000028482
annotation not available
   
 
 0.883
SMAX5B_017979
Putative phosphatidylcholine:ceramide cholinephosphotransferase 1.
   
 
 0.883
SMAX5B_007241
Neutral ceramidase.
     
 0.881
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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