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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAX5B_003596Putative carbonic anhydrase 15-like; Belongs to the alpha-carbonic anhydrase family. (316 aa)    
Predicted Functional Partners:
SMAX5B_001315
Brix domain-containing protein 1 isoform 2.
   
 
 0.729
SMAX5B_001942
Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family.
   
 
 0.641
SMAX5B_015504
60S ribosomal protein L11; Belongs to the universal ribosomal protein uL5 family.
    
 
 0.634
RPL5
60S ribosomal protein L5 isoform 2.
    
 
 0.631
SMAX5B_001618
Carbonic anhydrase 1; Belongs to the alpha-carbonic anhydrase family.
  
 
0.631
SMAX5B_006174
60S ribosomal protein L5.
    
 
 0.631
SMAX5B_001319
Putative carbonic anhydrase isoform 2; Belongs to the alpha-carbonic anhydrase family.
  
 
0.627
SMAX5B_000821
Alpha-carbonic anhydrase domain-containing protein; Belongs to the alpha-carbonic anhydrase family.
  
 
 
0.583
SMAX5B_012109
Putative glutamate-rich WD repeat-containing protein 1.
   
  
 0.579
ENSSMAP00000025330
Carbonic anhydrase XII.
  
  
0.562
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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