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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAX5B_007658Putative cyclin-related protein FAM58A-like. (259 aa)    
Predicted Functional Partners:
ENSSMAP00000011182
Cyclin-dependent kinase 9 (CDC2-related kinase).
   
 0.925
SMAX5B_011125
Putative cyclin-dependent kinase 12-like.
   
 0.907
SMAX5B_009590
Cell division cycle 2-like protein kinase 5.
   
 0.907
SMAX5B_007511
Putative syntaxin-8.
    
 0.892
SMAX5B_010458
Putative synaptobrevin-like YKT6 isoform 4; Belongs to the synaptobrevin family.
    
 0.881
SMAX5B_017251
t-SNARE coiled-coil homology domain-containing protein.
    
  0.875
SMAX5B_018911
Transcription elongation factor SPT5.
    
 0.825
SMAX5B_008299
Putative syntaxin-7; Belongs to the syntaxin family.
    
  0.790
SMAX5B_002091
Putative syntaxin-12-like; Belongs to the syntaxin family.
    
  0.790
SMAX5B_013689
Putative syntaxin-12-like; Belongs to the syntaxin family.
    
  0.790
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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