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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAX5B_006361Putative mitochondrial ubiquitin ligase activator of nfkb 1-A-like. (357 aa)    
Predicted Functional Partners:
SMAX5B_002701
Putative transmembrane protein 115-like.
   
    0.789
SMAX5B_005888
Putative UBX domain-containing protein 7.
    
  0.776
SMAX5B_016605
Ubiquitin carboxyl-terminal hydrolase.
     
 0.764
SMAX5B_007839
Putative mitochondrial import receptor subunit TOM70.
     
 0.695
ENSSMAP00000008002
Ribosomal protein S27a.
    
  0.691
ENSSMAP00000000415
annotation not available
    
  0.677
ENSSMAP00000014581
annotation not available
    
  0.677
TOMM20
Putative mitochondrial import receptor subunit TOM20-like.
     
 0.660
SMAX5B_021183
Putative mitochondrial import receptor subunit TOM20-like.
     
 0.660
SMAX5B_001446
Cellular tumor antigen p53; Acts as a tumor suppressor in many tumor types; induces growth arrest or apoptosis depending on the physiological circumstances and cell type. Involved in cell cycle regulation as a trans-activator that acts to negatively regulate cell division by controlling a set of genes required for this process. One of the activated genes is an inhibitor of cyclin-dependent kinases. Apoptosis induction seems to be mediated either by stimulation of BAX and FAS antigen expression, or by repression of Bcl-2 expression; Belongs to the p53 family.
    
   0.645
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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