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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAX5B_000122Putative receptor-type tyrosine-protein phosphatase kappa. (1430 aa)    
Predicted Functional Partners:
SMAX5B_011937
Catenin beta-1.
    
 0.817
SMAX5B_015859
Catenin beta-1.
    
 0.808
PTK7
Putative inactive tyrosine-protein kinase 7; Belongs to the protein kinase superfamily. Tyr protein kinase family.
    
 0.705
ENSSMAP00000001723
Leucine-rich repeat, immunoglobulin-like and transmembrane domains 1a.
    
  0.697
ENSSMAP00000004077
Leucine-rich repeat, immunoglobulin-like and transmembrane domains 1b.
    
  0.697
ENSSMAP00000016082
Info leucine-rich repeat, immunoglobulin-like and transmembrane domains 3a.
    
  0.697
ENSSMAP00000022168
Leucine-rich repeat, immunoglobulin-like and transmembrane domains 3b.
    
  0.697
ENSSMAP00000011847
Receptor tyrosine kinase-like orphan receptor 2.
    
  0.691
SMAX5B_022624
Tyrosine-protein kinase transmembrane receptor; Belongs to the protein kinase superfamily. Tyr protein kinase family.
    
  0.691
SMAX5B_006700
Growth factor receptor-bound protein 2.
   
 0.675
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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