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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAX5B_019965Putative tetratricopeptide repeat protein 36. (209 aa)    
Predicted Functional Partners:
SMAX5B_001914
Hgd protein.
   
  
 0.822
SMAX5B_004227
4-hydroxyphenylpyruvate dioxygenase.
   
 
 0.723
SMAX5B_010858
4-hydroxyphenylpyruvate dioxygenase.
   
 
 0.723
SMAX5B_020012
Fumarylacetoacetase.
   
  
 0.695
SMAX5B_017326
4-hydroxyphenylpyruvate dioxygenase-like protein.
   
 
 0.539
HAAO
3-hydroxyanthranilate 3,4-dioxygenase; Catalyzes the oxidative ring opening of 3-hydroxyanthranilate to 2-amino-3-carboxymuconate semialdehyde, which spontaneously cyclizes to quinolinate; Belongs to the 3-HAO family.
   
  
 0.488
GCC2
Putative GRIP and coiled-coil domain-containing protein 2.
      
 0.457
SMAX5B_017202
Claudin; Plays a major role in tight junction-specific obliteration of the intercellular space, through calcium-independent cell-adhesion activity; Belongs to the claudin family.
   
    0.429
ENSSMAP00000007583
Aminocarboxymuconate semialdehyde decarboxylase.
   
  
 0.419
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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