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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAX5B_018620Putative suppressor protein SRP40-like. (529 aa)    
Predicted Functional Partners:
SMAX5B_016962
Ash2-like.
    
 0.840
SMAX5B_002807
Retinoblastoma-binding protein 5.
   
 0.831
SMAX5B_000354
Histone-binding protein RBBP4.
   
 0.792
SMAX5B_002919
Histone-binding protein RBBP7.
   
 0.792
SMAX5B_006941
WD_REPEATS_REGION domain-containing protein.
   
 0.792
ENSSMAP00000019358
Embryonic ectoderm development.
   
 0.783
ENSSMAP00000012270
annotation not available
    
 0.741
ENSSMAP00000012297
annotation not available
    
 0.741
SMAX5B_022376
Histone-lysine N-methyltransferase, H3 lysine-79 specific.
   
 0.716
SMAX5B_010818
Putative SET-binding protein-like.
   
 0.711
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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