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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAX5B_0016752-(3-amino-3-carboxypropyl)histidine synthase subunit 2; Required for the first step in the synthesis of diphthamide, a post-translational modification of histidine which occurs in translation elongation factor 2. (495 aa)    
Predicted Functional Partners:
SMAX5B_015212
Putative diphthamide biosynthesis protein 1-like.
   
0.999
SMAX5B_002122
Putative DPH3-like.
   
 0.998
SMAX5B_001038
Putative diphthine synthase.
   
 0.951
SMAX5B_006022
Putative elongation factor 2-like.
    
 0.940
SMAX5B_022489
Putative elongation factor 2-like.
    
 0.940
SMAX5B_011220
116 kDa U5 small nuclear ribonucleoprotein component.
    
 0.907
GFM1
Elongation factor G, mitochondrial; Mitochondrial GTPase that catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome. Does not mediate the disassembly of ribosomes from messenger RNA at the termination of mito [...]
    
 0.907
EFL1
Putative elongation factor Tu GTP-binding domain-containing protein 1 isoform 2.
    
 0.907
SMAX5B_015223
RNA helicase.
  
   0.857
SMAX5B_002202
U3 small nucleolar RNA-interacting protein 2 isoform 2.
   
    0.835
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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