SMAX5B_000450 protein (Scophthalmus maximus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

SMAX5B_000450

Putative serine protease HTRA2 mitochondrial-like. (444 aa)

Predicted Functional Partners:

ENSSMAP00000006071

0.984

SMAX5B_006406

0.984

SMAX5B_018954

0.950

ENSSMAP00000016007

0.930

SMAX5B_014484

0.905

SMAX5B_020087

0.905

SMAX5B_022601

0.866

SMAX5B_008528

0.866

SMAX5B_014957

0.842

KATNAL2

0.830

Your Current Organism:

Scophthalmus maximus

NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSSMAP00000006071	KATNAL2	ENSSMAP00000006071	ENSSMAP00000028383	Sterol carrier protein 2b.	Katanin p60 ATPase-containing subunit A-like 2; Severs microtubules in vitro in an ATP-dependent manner. This activity may promote rapid reorganization of cellular microtubule arrays.	0.420
ENSSMAP00000006071	SMAX5B_000450	ENSSMAP00000006071	ENSSMAP00000002254	Sterol carrier protein 2b.	Putative serine protease HTRA2 mitochondrial-like.	0.984
ENSSMAP00000006071	SMAX5B_006406	ENSSMAP00000006071	ENSSMAP00000015991	Sterol carrier protein 2b.	Putative non-specific lipid-transfer protein; Belongs to the thiolase-like superfamily. Thiolase family.	0.973
ENSSMAP00000006071	SMAX5B_008528	ENSSMAP00000006071	ENSSMAP00000027984	Sterol carrier protein 2b.	Putative baculoviral IAP repeat-containing protein 6-like.	0.641
ENSSMAP00000016007	SMAX5B_000450	ENSSMAP00000016007	ENSSMAP00000002254	Baculoviral IAP repeat containing 2.	Putative serine protease HTRA2 mitochondrial-like.	0.930
ENSSMAP00000016007	SMAX5B_008528	ENSSMAP00000016007	ENSSMAP00000027984	Baculoviral IAP repeat containing 2.	Putative baculoviral IAP repeat-containing protein 6-like.	0.719
ENSSMAP00000016007	SMAX5B_014484	ENSSMAP00000016007	ENSSMAP00000003877	Baculoviral IAP repeat containing 2.	Putative baculoviral IAP repeat-containing protein 5.1-A-like isoform 3.	0.913
ENSSMAP00000016007	SMAX5B_018954	ENSSMAP00000016007	ENSSMAP00000016957	Baculoviral IAP repeat containing 2.	Putative E3 ubiquitin-protein ligase XIAP isoform 2.	0.946
ENSSMAP00000016007	SMAX5B_020087	ENSSMAP00000016007	ENSSMAP00000017131	Baculoviral IAP repeat containing 2.	Putative baculoviral IAP repeat-containing protein 5-like isoform 2.	0.918
ENSSMAP00000016007	SMAX5B_022601	ENSSMAP00000016007	ENSSMAP00000002706	Baculoviral IAP repeat containing 2.	26S proteasome non-ATPase regulatory subunit 1; Component of the 26S proteasome, a multiprotein complex involved in the ATP-dependent degradation of ubiquitinated proteins. This complex plays a key role in the maintenance of protein homeostasis by removing misfolded or damaged proteins, which could impair cellular functions, and by removing proteins whose functions are no longer required. Therefore, the proteasome participates in numerous cellular processes, including cell cycle progression, apoptosis, or DNA damage repair; Belongs to the proteasome subunit S1 family.	0.563
KATNAL2	ENSSMAP00000006071	ENSSMAP00000028383	ENSSMAP00000006071	Katanin p60 ATPase-containing subunit A-like 2; Severs microtubules in vitro in an ATP-dependent manner. This activity may promote rapid reorganization of cellular microtubule arrays.	Sterol carrier protein 2b.	0.420
KATNAL2	SMAX5B_000450	ENSSMAP00000028383	ENSSMAP00000002254	Katanin p60 ATPase-containing subunit A-like 2; Severs microtubules in vitro in an ATP-dependent manner. This activity may promote rapid reorganization of cellular microtubule arrays.	Putative serine protease HTRA2 mitochondrial-like.	0.830
KATNAL2	SMAX5B_006406	ENSSMAP00000028383	ENSSMAP00000015991	Katanin p60 ATPase-containing subunit A-like 2; Severs microtubules in vitro in an ATP-dependent manner. This activity may promote rapid reorganization of cellular microtubule arrays.	Putative non-specific lipid-transfer protein; Belongs to the thiolase-like superfamily. Thiolase family.	0.420
KATNAL2	SMAX5B_008528	ENSSMAP00000028383	ENSSMAP00000027984	Katanin p60 ATPase-containing subunit A-like 2; Severs microtubules in vitro in an ATP-dependent manner. This activity may promote rapid reorganization of cellular microtubule arrays.	Putative baculoviral IAP repeat-containing protein 6-like.	0.820
KATNAL2	SMAX5B_014484	ENSSMAP00000028383	ENSSMAP00000003877	Katanin p60 ATPase-containing subunit A-like 2; Severs microtubules in vitro in an ATP-dependent manner. This activity may promote rapid reorganization of cellular microtubule arrays.	Putative baculoviral IAP repeat-containing protein 5.1-A-like isoform 3.	0.447
KATNAL2	SMAX5B_020087	ENSSMAP00000028383	ENSSMAP00000017131	Katanin p60 ATPase-containing subunit A-like 2; Severs microtubules in vitro in an ATP-dependent manner. This activity may promote rapid reorganization of cellular microtubule arrays.	Putative baculoviral IAP repeat-containing protein 5-like isoform 2.	0.447
KATNAL2	SMAX5B_022601	ENSSMAP00000028383	ENSSMAP00000002706	Katanin p60 ATPase-containing subunit A-like 2; Severs microtubules in vitro in an ATP-dependent manner. This activity may promote rapid reorganization of cellular microtubule arrays.	26S proteasome non-ATPase regulatory subunit 1; Component of the 26S proteasome, a multiprotein complex involved in the ATP-dependent degradation of ubiquitinated proteins. This complex plays a key role in the maintenance of protein homeostasis by removing misfolded or damaged proteins, which could impair cellular functions, and by removing proteins whose functions are no longer required. Therefore, the proteasome participates in numerous cellular processes, including cell cycle progression, apoptosis, or DNA damage repair; Belongs to the proteasome subunit S1 family.	0.998
SMAX5B_000450	ENSSMAP00000006071	ENSSMAP00000002254	ENSSMAP00000006071	Putative serine protease HTRA2 mitochondrial-like.	Sterol carrier protein 2b.	0.984
SMAX5B_000450	ENSSMAP00000016007	ENSSMAP00000002254	ENSSMAP00000016007	Putative serine protease HTRA2 mitochondrial-like.	Baculoviral IAP repeat containing 2.	0.930
SMAX5B_000450	KATNAL2	ENSSMAP00000002254	ENSSMAP00000028383	Putative serine protease HTRA2 mitochondrial-like.	Katanin p60 ATPase-containing subunit A-like 2; Severs microtubules in vitro in an ATP-dependent manner. This activity may promote rapid reorganization of cellular microtubule arrays.	0.830