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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GATA2Putative endothelial transcription factor GATA-2. (446 aa)    
Predicted Functional Partners:
SMAX5B_020543
T-box brain protein 1.
   
 0.884
SMAX5B_010029
Rhombotin-2.
    
 0.817
SMAX5B_005967
T-cell acute lymphocytic leukemia protein 1.
   
 0.811
SMAX5B_022692
Runt-related transcription factor.
    
 0.799
ENSSMAP00000028067
annotation not available
   
 0.788
SMAX5B_000089
Putative hepatocyte nuclear factor 3-beta-like.
    
 0.774
SMAX5B_003493
Hepatocyte nuclear factor 3-beta.
    
 0.774
SMAX5B_015433
Putative zinc finger protein ZFPM1.
    
 0.772
SMAX5B_018067
LIM domain-binding protein 1.
    
 0.769
SMAX5B_002061
Putative LIM domain-binding protein 1 isoform 2.
    
 0.769
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.