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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAX5B_012552Putative methenyltetrahydrofolate synthase domain-containing protein. (479 aa)    
Predicted Functional Partners:
SMAX5B_006832
Trifunctional purine biosynthetic protein adenosine-3; In the C-terminal section; belongs to the GART family. In the central section; belongs to the AIR synthase family.
   
 0.936
SMAX5B_021202
5-formyltetrahydrofolate cyclo-ligase; Belongs to the 5-formyltetrahydrofolate cyclo-ligase family.
     
 0.919
SMAX5B_003209
Putative methionyl-tRNA formyltransferase mitochondrial isoform 3.
  
 
 0.910
SMAX5B_000321
C-1-tetrahydrofolate synthase cytoplasmic isoform 2.
   
 0.907
SMAX5B_019664
Putative monofunctional C1-tetrahydrofolate synthase mitochondrial.
   
 0.907
SMAX5B_010317
Putative bifunctional methylenetetrahydrofolate dehydrogenase/cyclohydrolase 2.
    
 0.897
SMAX5B_016454
annotation not available
    
 0.897
SMAX5B_012364
Putative bifunctional purine biosynthesis protein PURH.
    
 0.896
SMAX5B_014230
Putative nucleolar protein 56.
   
    0.873
ENSSMAP00000000034
Formimidoyltransferase cyclodeaminase.
    
 0.866
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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