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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAX5B_007094Putative endonuclease domain-containing 1 protein-like. (1335 aa)    
Predicted Functional Partners:
SMAX5B_010377
Putative zinc phosphodiesterase ELAC protein 1.
  
   0.820
SMAX5B_015978
Putative zinc phosphodiesterase ELAC protein 2.
  
   0.820
SMAX5B_004063
Putative apoptosis-inducing factor 1 mitochondrial-like.
    
 
 0.755
SMAX5B_015889
Putative potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 2-like.
   
    0.641
SMAX5B_011740
NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial; Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain.
   
    0.641
SMAX5B_006294
Putative flap endonuclease 1-like.
   
 
 0.545
FEN1
Flap endonuclease 1; Structure-specific nuclease with 5'-flap endonuclease and 5'- 3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. It enters the flap from the 5'-end and then tracks to cleave the flap base, leaving a nick for ligation. Also involved in the long patch base excision repair (LP-BER) pathway, by cleaving within the apurinic/apyrimidinic (AP) site- terminated flap. Acts as [...]
   
 
 0.545
SMAX5B_007274
Putative NADH dehydrogenase isoform 2.
   
    0.526
SMAX5B_008528
Putative baculoviral IAP repeat-containing protein 6-like.
    
 
 0.509
SMAX5B_021151
Putative apoptosis-inducing factor 2-like isoform 2.
    
 
 0.488
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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