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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAX5B_000031Putative SAYSvFN domain-containing protein 1-like. (174 aa)    
Predicted Functional Partners:
ENSSMAP00000015111
MAPK regulated corepressor interacting protein 1.
      
 0.532
SMAX5B_014146
Putative tubulin polyglutamylase complex subunit 2.
      
 0.495
SMAX5B_001054
Putative tRNA:m(4)X modification enzyme TRM13-like.
      
 0.469
SMAX5B_001252
Putative UPF0489 protein C5orf22-like.
      
 0.469
SMAX5B_020219
Putative dehydrogenase/reductase SDR family member 7C-A-like.
      
 0.455
SMAX5B_016031
Putative dehydrogenase/reductase SDR family member 7C-B-like isoform 2.
      
 0.455
SMAX5B_008120
Putative phosphatidylinositol N-acetylglucosaminyltransferase subunit H isoform 2.
   
  
 0.429
SMAX5B_019032
NTF2-related export protein 2.
      
 0.420
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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