close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSMAP00000002396Collagen, type IV, alpha 6. (1779 aa)    
Predicted Functional Partners:
SMAX5B_007298
Uncharacterized protein.
    
  0.763
ENSSMAP00000005049
annotation not available
   
 
0.683
SMAX5B_010271
Integrin beta; Belongs to the integrin beta chain family.
    
 0.678
ENSSMAP00000004730
Integrin, beta 1a.
    
 0.672
ENSSMAP00000020695
Integrin, beta 6.
    
 0.672
SMAX5B_007191
Integrin beta; Belongs to the integrin beta chain family.
    
 0.671
SMAX5B_020151
Integrin beta.
   
 0.670
SMAX5B_015913
Integrin beta; Belongs to the integrin beta chain family.
    
  0.658
SMAX5B_011995
Putative integrin alpha-8; Belongs to the integrin alpha chain family.
    
 0.648
SMAX5B_020277
Putative integrin alpha-3; Belongs to the integrin alpha chain family.
    
 0.643
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.