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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAX5B_008071Putative R-spondin-2-like. (294 aa)    
Predicted Functional Partners:
SMAX5B_012713
Leucine-rich repeat-containing G protein-coupled receptor 4-like.
  
 0.941
ENSSMAP00000021125
Zinc and ring finger 3.
   
 0.940
ENSSMAP00000000637
annotation not available
   
 0.934
LGR6
Putative leucine-rich repeat-containing G-protein coupled receptor 6-like.
    
 0.934
LGR5
Putative leucine-rich repeat-containing G-protein coupled receptor 5.
  
 0.930
SMAX5B_012183
Uncharacterized protein.
  
  
0.863
SMAX5B_002555
R-spondin-1.
  
  
0.861
SMAX5B_009257
Putative FRAS1-related extracellular matrix protein 1-like.
    
 0.840
SMAX5B_013751
Putative FRAS1-related extracellular matrix protein 1.
    
 0.840
ENSSMAP00000013306
R-spondin 2.
  
  
0.823
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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