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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAX5B_022071Putative cadherin-related family member 5-like. (814 aa)    
Predicted Functional Partners:
SMAX5B_019234
Putative cadherin-related family member 2.
  
0.916
SMAX5B_008540
Putative cadherin-23 isoform 2.
   
0.909
SMAX5B_010570
Lipoma HMGIC fusion partner-like 3 protein.
   
 0.717
ENSSMAP00000006761
annotation not available
   
 0.717
SMAX5B_002746
Putative lipoma HMGIC fusion partner-like 4 protein.
   
 0.717
SMAX5B_014195
Lipoma HMGIC fusion partner-like 5.
   
 0.717
SMAX5B_010061
Putative lipoma HMGIC fusion partner-like 3 protein.
   
 0.717
SMAX5B_014871
Putative tetraspan membrane protein of hair cell stereocilia-like.
   
 0.717
SMAX5B_009843
Putative four-jointed box protein 1.
   
 0.698
ENSSMAP00000015784
Usher syndrome 1C.
   
 
 0.689
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.