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The next version of STRING is ready for use in your analyses: updated networks across STRING newly available directed regulatory networks a new typed view showing functional, physical, and regulatory edges in one network new clustering options and cluster-based layouts … and much more!
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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSMAP00000002500Cytochrome c oxidase subunit 4I1. (169 aa)    
Predicted Functional Partners:
SMAX5B_010821
Cytochrome c oxidase subunit VIIc.
   
 0.998
SMAX5B_012858
Cytochrome c domain-containing protein.
   
 0.996
ENSSMAP00000007832
Ubiquinol-cytochrome c reductase, complex III subunit VII.
   
 0.996
ENSSMAP00000028671
Cytochrome c oxidase subunit 6C.
   
 0.996
SMAX5B_015626
Cytochrome b-c1 complex subunit 7; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is part of the mitochondrial respiratory chain; Belongs to the UQCRB/QCR7 family.
   
 0.995
COX5B
Cytochrome c oxidase subunit 5B mitochondrial.
   
 0.994
SMAX5B_013167
Putative cytochrome c oxidase subunit 5A mitochondrial-like isoform 2.
   
 0.994
COX5A
Cytochrome c oxidase subunit 5A.
   
 0.994
SMAX5B_008539
Putative cytochrome c oxidase subunit 5B mitochondrial-like.
   
 0.994
SMAX5B_003667
Putative cytochrome b-c1 complex subunit 9-like.
   
 0.993
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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