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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAX5B_011236Cleavage stimulation factor subunit 1. (431 aa)    
Predicted Functional Partners:
ENSSMAP00000003606
Cleavage stimulation factor, 3' pre-RNA, subunit 3.
    
 0.999
SMAX5B_009407
Putative cleavage stimulation factor subunit 2-like.
    
 0.999
SMAX5B_000047
Cleavage and polyadenylation specificity factor subunit 2.
   
 0.997
SMAX5B_006601
Putative cleavage and polyadenylation specificity factor subunit 4 isoform 2.
   
 0.974
CPSF3
Cleavage and polyadenylation specificity factor subunit 3.
   
 0.965
SMAX5B_016867
Putative zinc finger CCCH domain-containing protein 6-like.
   
 0.946
SMAX5B_001655
Uncharacterized protein.
   
 0.946
SMAX5B_013642
DUF4603 domain containing protein.
   
 0.946
SMAX5B_009238
Putative zinc finger CCCH domain-containing protein 3.
   
 0.946
SMAX5B_019862
Putative zinc finger CCCH domain-containing protein 4.
   
 0.946
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.