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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAX5B_000414Homeobox protein SIX6. (226 aa)    
Predicted Functional Partners:
SMAX5B_015932
Eyes absent homolog; Belongs to the HAD-like hydrolase superfamily. EYA family.
   
 
 0.682
SMAX5B_008188
Eyes absent homolog; Belongs to the HAD-like hydrolase superfamily. EYA family.
   
 
 0.682
SMAX5B_005143
Eyes absent homolog; Belongs to the HAD-like hydrolase superfamily. EYA family.
   
 
 0.682
SMAX5B_001822
Eyes absent homolog; Belongs to the HAD-like hydrolase superfamily. EYA family.
   
 
 0.682
SMAX5B_021617
Putative ventral anterior homeobox 2.
   
 
 0.421
TLE4
Putative transducin-like enhancer protein 1-like.
    
 
 0.414
SMAX5B_022529
Si:ch211-81i17.1.
    
 
 0.414
ENSSMAP00000014518
TLE family member 2, transcriptional corepressor b.
    
 
 0.414
SMAX5B_022495
Putative transducin-like enhancer protein 4.
    
 
 0.414
ENSSMAP00000014568
TLE family member 5, transcriptional modulator.
    
 
 0.414
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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