Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSSMAP00000002608PHD finger protein 8. (1022 aa)    
Predicted Functional Partners:
ENSSMAP00000005484
Suppressor of variegation 3-9 homolog 1b.
    
 0.883
SMAX5B_004110
S-phase kinase-associated protein 1-like protein; Belongs to the SKP1 family.
    
 0.827
SMAX5B_015765
Uncharacterized protein.
   
 
 0.777
SMAX5B_001246
E3 ubiquitin-protein ligase RING2.
    
 
 0.754
SMAX5B_022026
Putative AT-rich interactive domain-containing protein 5B-like.
    
 0.745
SMAX5B_012235
Putative AT-rich interactive domain-containing protein 5B-like; Belongs to the hexokinase family.
    
 0.720
SMAX5B_000678
Histone H3; Belongs to the histone H3 family.
    
 0.694
H3-3B
H3.3 histone B.
    
 0.694
ENSSMAP00000010390
annotation not available
    
 0.694
H3-2
H3.2 histone (putative).
    
 0.694
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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