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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAX5B_018386Uncharacterized protein. (291 aa)    
Predicted Functional Partners:
SMAX5B_000717
Ribosome biogenesis protein NOP53; May play a role in ribosome biogenesis. Belongs to the NOP53 family.
   
    0.895
ENSSMAP00000000570
Bystin-like.
   
  
 0.874
ENSSMAP00000034134
LTV1 ribosome biogenesis factor.
   
    0.861
SMAX5B_001315
Brix domain-containing protein 1 isoform 2.
   
   0.843
SMAX5B_015730
Putative rRNA-processing protein UTP23-like isoform 2.
   
    0.833
SMAX5B_021659
Putative MKI67 FHA domain-interacting nucleolar phosphoprotein.
   
    0.832
SMAX5B_013633
Putative ribosomal RNA processing protein 1-like A.
   
    0.828
SMAX5B_015972
Putative nucleolar protein 10.
   
  
 0.816
SMAX5B_002206
Putative something about silencing protein 10.
   
    0.799
SMAX5B_010103
Putative ribosome biogenesis protein RLP24.
   
    0.794
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.