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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAX5B_006544Putative WD repeat-containing protein 47-like. (926 aa)    
Predicted Functional Partners:
SMAX5B_006349
Putative calmodulin-regulated spectrin-associated protein 2-like.
 
 
 
 0.680
SMAX5B_022247
Putative calmodulin-regulated spectrin-associated protein 2.
 
 
 
 0.679
SMAX5B_020820
Putative calmodulin-regulated spectrin-associated protein 3.
 
 
 
 0.678
SMAX5B_011426
Putative calmodulin-regulated spectrin-associated protein 3-like.
 
 
 
 0.678
SMAX5B_003468
Putative F-box only protein 33.
      
 0.531
SMAX5B_005889
Geranylgeranyl transferase type-2 subunit beta; Catalyzes the transfer of a geranylgeranyl moiety from geranylgeranyl diphosphate to both cysteines of proteins with the C- terminal sequence -XXCC, -XCXC and -CCXX.
      
 0.503
WDR63
Putative WD repeat-containing protein 63.
      
 0.493
SMAX5B_013894
Putative calmodulin-regulated spectrin-associated protein 1-B-like.
 
 
 
 0.481
SMAX5B_010470
Putative calmodulin-regulated spectrin-associated protein 1.
 
 
 
 0.481
SMAX5B_008208
Nucleoside diphosphate kinase.
      
 0.448
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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