Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
SMAX5B_018378Putative filamin A-interacting protein 1-like. (1057 aa)    
Predicted Functional Partners:
SMAX5B_011550
Coronin; Belongs to the WD repeat coronin family.
   
 0.815
SMAX5B_009437
Syntaxin 5A isoform 2; Belongs to the PDGF/VEGF growth factor family.
    
 0.808
SMAX5B_008008
Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.
    
 0.806
SMAX5B_013423
Putative trafficking protein particle complex subunit 6B-like isoform 2.
    
 0.805
TRAPPC5
Trafficking protein particle complex subunit 5; May play a role in vesicular transport from endoplasmic reticulum to Golgi.
    
 0.804
SMAX5B_000949
Putative trafficking protein particle complex subunit 8 isoform 2.
    
 0.800
SMAX5B_005889
Geranylgeranyl transferase type-2 subunit beta; Catalyzes the transfer of a geranylgeranyl moiety from geranylgeranyl diphosphate to both cysteines of proteins with the C- terminal sequence -XXCC, -XCXC and -CCXX.
    
 0.800
SMAX5B_000622
Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.
    
 0.798
SMAX5B_018382
Isoform 2 of Trafficking protein particle complex subunit 2 isoform 2.
    
 0.750
SMAX5B_002838
Transmembrane emp24 domain-containing protein 10.
   
 0.740
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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