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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAX5B_000869Putative myotubularin-related protein 5. (1818 aa)    
Predicted Functional Partners:
SMAX5B_017555
Myotubularin.
   
0.819
SMAX5B_017551
Putative myotubularin-related protein 1-like.
   
0.819
SMAX5B_004296
Myotubularin-related protein 2.
   
0.819
SMAX5B_016941
Uncharacterized protein.
    
 0.797
MTMR4
Putative myotubularin-related protein 4.
   
0.793
SMAX5B_009538
Putative myotubularin-related protein 3.
   
0.793
FIG4
Putative polyphosphoinositide phosphatase.
     
 0.781
SMAX5B_021633
Phosphatidylinositol 3-kinase catalytic subunit type 3.
     
 0.680
SMAX5B_001660
Deleted in autism protein 1-like.
     
 0.650
SMAX5B_005558
Putative phosphatidylinositol 4-phosphate 3-kinase C2 domain-containing subunit beta; Belongs to the PI3/PI4-kinase family.
    
 0.642
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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