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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAX5B_000063Putative akirin-2-like. (179 aa)    
Predicted Functional Partners:
SMAX5B_014298
Proteasome subunit alpha type.
    
   0.858
SMAX5B_018837
Proteasome subunit alpha type.
    
   0.840
SMAX5B_012060
Proteasome subunit alpha type.
    
   0.838
SMAX5B_015676
Proteasome subunit beta.
    
   0.833
SMAX5B_001912
Proteasome subunit beta.
    
   0.830
SMAX5B_022460
Putative E3 ubiquitin-protein ligase RNF220-like.
    
 
 0.782
SMAX5B_005078
Proteasome subunit alpha type.
    
   0.728
ENSSMAP00000015851
Proteasome 20S subunit alpha 4.
    
   0.728
SMAX5B_005736
Proteasome subunit alpha type.
    
   0.728
SMAX5B_012620
Proteasome subunit beta.
    
   0.720
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.