STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAX5B_014051Putative deoxyribonuclease TATDN2. (586 aa)    
Predicted Functional Partners:
ENSSMAP00000002743
Coiled-coil domain containing 174.
 
 
  
 0.628
ENDOV
Putative endonuclease V-like.
    
  0.559
SMAX5B_021742
Uroporphyrinogen decarboxylase; Belongs to the uroporphyrinogen decarboxylase family.
    
  0.559
SMAX5B_006947
Tyrosine--tRNA ligase.
  
 
 0.540
SMAX5B_000285
Mitochondrial fission regulator 1-like.
      
 0.506
SMAX5B_010664
Putative single-stranded DNA-binding protein mitochondrial isoform 2.
  
    0.493
SMAX5B_003753
Putative mitochondrial inner membrane protein OXA1L isoform 3.
  
  
 0.490
SMAX5B_004410
Putative pyridoxal-dependent decarboxylase domain-containing protein 1.
      
 0.480
SMAX5B_018470
Putative solute carrier family 12 member 8.
     
 0.465
ENSSMAP00000022971
annotation not available
      
 0.463
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.