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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAX5B_011421Putative lecithin retinol acyltransferase-like. (218 aa)    
Predicted Functional Partners:
SMAX5B_010404
Putative cyclin-G-associated kinase-like.
   
 0.995
SMAX5B_013602
GrpE protein homolog; Essential component of the PAM complex, a complex required for the translocation of transit peptide-containing proteins from the inner membrane into the mitochondrial matrix in an ATP-dependent manner; Belongs to the GrpE family.
  
 0.939
SMAX5B_015302
Putative dnaJ-like subfamily C member 10.
  
 0.896
CLPB
Putative caseinolytic peptidase B protein-like.
  
 
 0.890
SMAX5B_011499
Putative retinol dehydrogenase 8-like; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
   
 0.889
SMAX5B_021046
Putative retinol dehydrogenase 8-like; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
   
 0.889
ENSSMAP00000019390
Cytochrome P450, family 27, subfamily C, polypeptide 1.
    
 0.885
SMAX5B_016436
Putative short-chain dehydrogenase/reductase 3; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
 0.878
SMAX5B_007848
Retinol dehydrogenase 8; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
   
 0.873
SMAX5B_020857
Putative retinol dehydrogenase 8-like; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
   
 0.873
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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