Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SMAX5B_000874Putative ankyrin repeat and SOCS box protein 13-like. (297 aa)    
Predicted Functional Partners:
SMAX5B_000741
Putative F-box only protein 46-like.
      
 0.723
ENSSMAP00000008187
Kelch-like family member 29.
    
 0.722
SMAX5B_009616
Putative DNA-directed RNA polymerase I subunit RPA43.
   
 
 0.636
SMAX5B_014042
Putative THO complex subunit 7-like isoform 2.
      
 0.621
SMAX5B_019708
Churchill protein isoform 3.
      
 0.620
SMAX5B_001942
Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family.
   
 
 0.553
ENSSMAP00000032865
annotation not available
    
 
 0.547
ENSSMAP00000019412
annotation not available
  
 
  0.537
ENSSMAP00000002378
Ankyrin repeat domain 46b.
  
 
  0.536
ENSSMAP00000030322
annotation not available
  
 
  0.532
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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