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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSMAP00000002850Calcium channel, voltage-dependent, alpha 2/delta subunit 1a. (1075 aa)    
Predicted Functional Partners:
SMAX5B_020720
Voltage-dependent calcium channel gamma subunit.
    
 0.881
SMAX5B_007369
Voltage-dependent calcium channel gamma-1 subunit; Regulatory subunit of the voltage-gated calcium channel that gives rise to L-type calcium currents in skeletal muscle. Regulates channel inactivation kinetics.
    
 0.881
SMAX5B_011193
Putative voltage-dependent L-type calcium channel subunit beta-1-like.
   
 0.845
SMAX5B_005814
Putative cAMP-dependent protein kinase catalytic subunit beta; Belongs to the protein kinase superfamily.
   
 
  0.820
SMAX5B_017423
Putative calcium/calmodulin-dependent protein kinase type II subunit gamma-like.
   
 
  0.819
SMAX5B_004231
Serine/threonine-protein phosphatase.
   
 
  0.818
SMAX5B_004696
Serine/threonine-protein phosphatase.
   
 
  0.818
SMAX5B_008873
Serine/threonine-protein phosphatase.
   
 
  0.816
SMAX5B_013654
Putative ras-specific guanine nucleotide-releasing factor 2-like.
   
 
  0.813
SMAX5B_007754
Voltage-dependent L-type calcium channel subunit alpha; Voltage-sensitive calcium channels (VSCC) mediate the entry of calcium ions into excitable cells and are also involved in a variety of calcium-dependent processes, including muscle contraction, hormone or neurotransmitter release, gene expression, cell motility, cell division and cell death; Belongs to the calcium channel alpha-1 subunit (TC 1.A.1.11) family.
   
 0.811
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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