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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAX5B_003928Putative rho GTPase-activating protein 20. (529 aa)    
Predicted Functional Partners:
SMAX5B_022369
Putative heterogeneous nuclear ribonucleoprotein M-like.
   
 
 0.606
ENSSMAP00000001017
Nudix hydrolase 21.
   
 
 0.536
ENSSMAP00000018265
Yes-related kinase.
    
  0.524
SMAX5B_014946
Tyrosine-protein kinase.
    
  0.524
SMAX5B_014735
Tyrosine-protein kinase.
    
  0.524
SMAX5B_001235
Tyrosine-protein kinase.
    
  0.524
ENSSMAP00000029974
FYN proto-oncogene, Src family tyrosine kinase a.
    
  0.524
SMAX5B_016518
Putative RNA-binding protein EWS.
   
 
 0.492
SMAX5B_017223
Putative matrin-3 isoform 2.
   
 
 0.484
SMAX5B_020676
Putative RNA-binding protein FUS-like.
   
 
 0.484
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.