Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
SMAX5B_010882Putative neurofilament light polypeptide; Belongs to the intermediate filament family. (615 aa)    
Predicted Functional Partners:
SMAX5B_001823
Transient receptor potential cation channel subfamily c member 1; Belongs to the transient receptor (TC 1.A.4) family.
      
 0.696
SMAX5B_011324
Putative parvalbumin alpha; Belongs to the parvalbumin family.
    
 
 0.695
SMAX5B_004563
Putative neural cell adhesion molecule 1-like isoform 3.
    
 0.690
GAN
Gigaxonin.
    
 
 0.654
SMAX5B_006987
S100-B; Belongs to the S-100 family.
   
  
 0.636
SMAX5B_005295
Putative nestin; Belongs to the intermediate filament family.
    
 0.626
ENSSMAP00000026727
annotation not available
    
 0.626
SMAX5B_015184
Putative glutamate receptor ionotropic NMDA 1-like.
   
  0.592
SMAX5B_015237
Putative glutamate receptor ionotropic NMDA 1-like; Belongs to the type-B carboxylesterase/lipase family.
   
  0.592
ENSSMAP00000018603
Un-named hu7910.
   
 0.588
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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