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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAX5B_007268Chemokine ligand 12; Belongs to the intercrine alpha (chemokine CxC) family. (102 aa)    
Predicted Functional Partners:
SMAX5B_018293
Putative atypical chemokine receptor 3; Belongs to the G-protein coupled receptor 1 family.
    
 0.984
CXCR4
CXC chemokine receptor 4; Belongs to the G-protein coupled receptor 1 family.
   
 0.956
SMAX5B_006475
Putative C-X-C chemokine receptor type 4-like; Belongs to the G-protein coupled receptor 1 family.
   
 0.939
SMAX5B_019038
Putative c-X-C motif chemokine 14-like.
  
 
 0.937
ENSSMAP00000019160
annotation not available
   
 0.921
SMAX5B_018421
Putative C-X-C chemokine receptor type 1-like; Belongs to the G-protein coupled receptor 1 family.
    
 0.914
CXCL8
Interleukin-8; Belongs to the intercrine alpha (chemokine CxC) family.
   
 0.913
SMAX5B_015973
Putative C-C chemokine receptor type 6-like; Belongs to the G-protein coupled receptor 1 family.
    
 0.912
ENSSMAP00000007608
Si:cabz01093077.1.
    
 0.910
SMAX5B_017126
CC chemokine receptor 9; Belongs to the G-protein coupled receptor 1 family.
    
 0.905
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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