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The next version of STRING is ready for use in your analyses: updated networks across STRING newly available directed regulatory networks a new typed view showing functional, physical, and regulatory edges in one network new clustering options and cluster-based layouts … and much more!
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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSMAP00000002966annotation not available (152 aa)    
Predicted Functional Partners:
PUF60
poly(U) binding splicing factor 60.
   
   0.742
SMAX5B_016138
Uncharacterized protein.
   
 
 0.649
SMAX5B_016833
Putative AT-rich interactive domain-containing protein 4B isoform 2.
   
 
  0.642
SMAX5B_001062
Putative AT-rich interactive domain-containing protein 4A isoform 2.
   
 
  0.642
SMAX5B_005939
Putative THO complex subunit 1.
   
   0.620
ENSSMAP00000000783
Cyclin-dependent kinase 10.
   
   0.598
SMAX5B_002691
Putative cyclin-dependent kinase 11B-like isoform 2.
   
   0.598
SMAX5B_015278
Histone deacetylase complex subunit SAP18; Involved in the tethering of the SIN3 complex to core histone proteins.
   
 
  0.592
SMAX5B_007843
Putative histone deacetylase complex subunit SAP130.
   
 
  0.584
SMAX5B_016772
Histone deacetylase complex subunit SAP30L.
     
 0.493
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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