STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSMAP00000003000PHD finger protein 2. (1086 aa)    
Predicted Functional Partners:
SMAX5B_004110
S-phase kinase-associated protein 1-like protein; Belongs to the SKP1 family.
    
 0.851
ENSSMAP00000017597
annotation not available
    
 0.766
ENSSMAP00000018522
annotation not available
    
 0.766
H4C3
Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
    
 0.766
ENSSMAP00000022266
annotation not available
    
 0.766
ENSSMAP00000005484
Suppressor of variegation 3-9 homolog 1b.
    
 0.754
SMAX5B_000678
Histone H3; Belongs to the histone H3 family.
    
 0.747
H3-3B
H3.3 histone B.
    
 0.747
ENSSMAP00000010390
annotation not available
    
 0.747
H3-2
H3.2 histone (putative).
    
 0.747
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.