STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAX5B_008570Putative runt-related transcription factor 3-like. (307 aa)    
Predicted Functional Partners:
SMAX5B_017597
Putative histone H2A deubiquitinase MYSM1.
    
  0.982
SMAX5B_017803
Putative core-binding factor subunit beta-like.
    
 0.958
SMAX5B_001869
Putative CCAAT/enhancer-binding protein gamma-like.
    
 0.846
SMAX5B_020543
T-box brain protein 1.
   
 0.824
SMAX5B_012478
Transcription factor PU.1.
   
 0.819
SMAX5B_022692
Runt-related transcription factor.
  
  
 
0.816
SMAX5B_000661
Putative transforming protein p68/c-ets-1-like.
   
 0.810
SMAX5B_003529
ETS domain-containing protein.
   
 0.810
SMAX5B_010171
Putative MDS1 and EVI1 complex locus protein EVI1-like.
    
 0.806
SMAX5B_019949
Putative transcriptional coactivator YAP1.
    
 0.797
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.