STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CPNE3Putative copine-3-like. (572 aa)    
Predicted Functional Partners:
SMAX5B_018278
Putative ribonuclease H2 subunit B.
   
 
 0.666
ENSSMAP00000022923
Ribonuclease H2, subunit A.
   
 
 0.612
SMAX5B_021633
Phosphatidylinositol 3-kinase catalytic subunit type 3.
    
 0.583
SMAX5B_003193
Putative phosphatidylinositol 4-kinase beta; Belongs to the PI3/PI4-kinase family.
     
 0.535
ENSSMAP00000008181
Myocardin related transcription factor Bb.
     
 0.526
ENSSMAP00000010413
annotation not available
     
 0.526
MTMR4
Putative myotubularin-related protein 4.
   
 
 0.511
SMAX5B_009538
Putative myotubularin-related protein 3.
   
 
 0.511
SMAX5B_017555
Myotubularin.
     
 0.510
SMAX5B_017551
Putative myotubularin-related protein 1-like.
     
 0.510
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.