STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAX5B_018520Putative interphotoreceptor matrix proteoglycan 2. (1073 aa)    
Predicted Functional Partners:
SMAX5B_018177
Small ubiquitin-related modifier.
    
 0.869
SMAX5B_020963
Small ubiquitin-related modifier.
    
 0.869
ENSSMAP00000025116
annotation not available
    
 0.869
SMAX5B_015982
Small ubiquitin-related modifier.
    
 0.866
ENSSMAP00000006940
Si:dkey-21c19.3.
    
0.857
ENSSMAP00000028918
SUMO specific peptidase 2.
    
0.857
ENSSMAP00000027160
annotation not available
    
 0.806
SMAX5B_011681
Ipi1_N domain-containing protein.
    
 0.780
SMAX5B_015646
Putative nuclear pore complex protein Nup153.
   
 0.729
SMAX5B_015011
Putative polynucleotide 5'-hydroxyl-kinase NOL9.
    
 0.714
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.