close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAX5B_012421Putative synaptotagmin-9. (563 aa)    
Predicted Functional Partners:
SMAX5B_012637
Putative intersectin-2.
     
 0.679
SMAX5B_008282
Putative intersectin-2.
     
 0.679
SYT8
Putative synaptotagmin-1-like.
    
 
0.659
ENSSMAP00000000975
Vesicle-associated membrane protein 8 (endobrevin).
     
 0.656
VAMP3
Putative vesicle-associated membrane protein 2-like.
     
 0.652
ENSSMAP00000019849
DAB adaptor protein 2.
   
 
  0.623
SMAX5B_013156
Putative synaptotagmin-5-like.
    
 
0.600
SMAX5B_012912
Putative synaptotagmin-4.
    
 
0.600
SMAX5B_021719
Putative synaptotagmin-11.
    
 
0.600
SMAX5B_020323
Putative synaptotagmin-1-like.
  
0.591
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.